Tsys after flagging

uid___A002_Xa0b40d_X3cb8.ms

Flagging steps

Measurement Set nmedian derivative edgechans fieldshape birdies
uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl

Flagged data summary

Table: uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl
Summary of flagged data. Each cell states the amount of data flagged as a fraction of the specified data selection, with the Flagging Step columns giving this information per flagging step.
Data Selection flagged before Flagging Step flagged after
nmedian derivative edgechans fieldshape birdies
TOTAL 0.0% 0.0% 0.0% 5.1% 0.0% 0.1% 5.1%
BANDPASS 0.0% 0.0% 0.0% 5.1% 0.0% 0.1% 5.1%
AMPLITUDE 0.0% 0.0% 0.0% 5.1% 0.0% 0.1% 5.1%
PHASE N/A N/A N/A N/A N/A N/A N/A
TARGET 0.0% 0.0% 0.0% 5.1% 0.0% 0.1% 5.1%
ATMOSPHERE 0.0% 0.0% 0.0% 5.1% 0.0% 0.1% 5.1%

Flag Step Details

2015-07-15 16:58:42     INFO    hifa_tsysflag::pipeline.infrastructure.basetask::casa   Starting execution for stage 6
2015-07-15 16:58:44     INFO    hifa_tsysflag::pipeline.infrastructure.jobrequest::casa Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:58:44     INFO    flagdata::::casa        
2015-07-15 16:58:44     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:44     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:58:44     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:58:44     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:58:44     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:58:44     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:58:44     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:58:44     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:58:44     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:58:44     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:58:44     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:58:44     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:58:44     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:58:44     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:58:44     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:58:44     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:58:44     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:58:44     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:58:45     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:58:45     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:58:45     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:58:45     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:58:45     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:58:45     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:58:45     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:58:45     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:45     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:45     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:58:45     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:58:45     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:58:45     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:45     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:58:45     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:58:45     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:58:45     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:58:45     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:45     INFO    flagdata::pipeline.hifa.tasks.tsysflag.tsysflag::casa   flag nmedian
2015-07-15 16:58:46     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:58:46     INFO    flagdata::::casa        
2015-07-15 16:58:46     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:46     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:58:46     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:58:46     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:58:46     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:58:46     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:58:46     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:58:46     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:58:46     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:58:46     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:58:46     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:58:46     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:58:46     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:58:46     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:58:46     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:58:46     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:58:46     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:58:46     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:58:46     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:58:47     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:58:47     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:58:47     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:58:47     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:58:47     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:58:47     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:58:47     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:47     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:47     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:58:47     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:58:47     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:58:47     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:47     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:58:47     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:58:47     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:58:47     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:58:47     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:50     INFO    flagdata::pipeline.hifa.tasks.tsysflagspectra.tsysflagspectra::casa     Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:58:51     INFO    flagdata::pipeline.hif.tasks.common.viewflaggers::casa  flag nmedian - uid___A002_Xa0b40d_X3cb8.ms iteration 1 raised 0 flagging commands
2015-07-15 16:58:52     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:58:53     INFO    flagdata::::casa        
2015-07-15 16:58:53     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:53     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:58:53     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:58:53     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:58:53     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:58:53     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:58:53     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:58:53     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:58:53     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:58:53     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:58:53     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:58:53     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:58:53     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:58:53     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:58:53     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:58:53     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:58:53     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:58:53     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:58:53     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:58:53     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:58:53     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:58:53     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:58:53     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:58:53     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:58:53     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:58:53     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:53     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:53     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:58:53     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:58:53     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:58:53     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:53     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:58:53     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:58:53     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:58:53     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:58:53     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:53     INFO    flagdata::pipeline.hifa.tasks.tsysflag.tsysflag::casa   flag derivative
2015-07-15 16:58:54     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:58:54     INFO    flagdata::::casa        
2015-07-15 16:58:54     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:54     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:58:54     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:58:54     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:58:54     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:58:54     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:58:54     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:58:54     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:58:54     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:58:54     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:58:54     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:58:54     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:58:54     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:58:54     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:58:54     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:58:54     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:58:54     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:58:54     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:58:54     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:58:54     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:58:54     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:58:54     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:58:54     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:58:54     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:58:54     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:58:54     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:54     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:58:55     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:58:55     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:58:55     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:58:55     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:58:55     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:58:55     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:58:55     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:58:55     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:58:55     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:58:55     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:58:57     INFO    flagdata::pipeline.hifa.tasks.tsysflagspectra.tsysflagspectra::casa     Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:58:59     INFO    flagdata::pipeline.hif.tasks.common.viewflaggers::casa  flag derivative - uid___A002_Xa0b40d_X3cb8.ms iteration 1 raised 0 flagging commands
2015-07-15 16:59:00     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:00     INFO    flagdata::::casa        
2015-07-15 16:59:00     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:00     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:00     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:00     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:00     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:00     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:00     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:00     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:00     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:00     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:00     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:00     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:00     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:00     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:00     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:00     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:00     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:00     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:00     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:00     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:00     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:00     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:00     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:00     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:00     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:00     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:00     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:00     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:01     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:01     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:59:01     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:59:01     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:59:01     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:01     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:59:01     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:59:01     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:01     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:01     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:01     INFO    flagdata::pipeline.hifa.tasks.tsysflag.tsysflag::casa   flag edgechans
2015-07-15 16:59:02     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:04     INFO    flagdata::::casa        
2015-07-15 16:59:04     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:04     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:04     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:04     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:04     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:04     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:04     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:04     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:04     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:04     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:04     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:04     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:04     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:04     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:04     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:04     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:04     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:04     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:04     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:04     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:04     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:04     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:04     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:04     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:04     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:04     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:04     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:04     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA41 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA42 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA43 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA44 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA45 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA46 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA49 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA51 flagged: 8 total: 4096 (0.195%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA52 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA53 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA57 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA59 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA60 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA61 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA62 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA63 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DA64 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV01 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV02 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV04 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV05 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV08 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV09 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV10 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV11 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV12 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV14 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV15 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV16 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV17 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV18 flagged: 4 total: 4096 (0.0977%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV19 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV20 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV21 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV22 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       antenna DV23 flagged: 0 total: 4096 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       array -1 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       correlation Sol1 flagged: 12 total: 73728 (0.0163%)
2015-07-15 16:59:04     INFO    Summary::getResult       correlation Sol2 flagged: 4 total: 73728 (0.00543%)
2015-07-15 16:59:04     INFO    Summary::getResult       field IRAS16293-2422 flagged: 8 total: 73728 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       field J1517-2422 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       field Titan flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       observation 0 flagged: 16 total: 147456 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       scan 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       scan 3 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       scan 5 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       scan 8 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       spw 11 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       spw 13 flagged: 8 total: 36864 (0.0217%)
2015-07-15 16:59:04     INFO    Summary::getResult       spw 15 flagged: 4 total: 36864 (0.0109%)
2015-07-15 16:59:04     INFO    Summary::getResult       spw 9 flagged: 0 total: 36864 (0%)
2015-07-15 16:59:04     INFO    Summary::getResult       Total Flagged: 16 Total Counts: 147456 (0.0109%)
2015-07-15 16:59:04     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:04     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:04     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:07     INFO    flagdata::pipeline.hifa.tasks.tsysflagchans.tsysflagchans::casa Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:59:09     WARN    flagdata::pipeline.hif.tasks.common.viewflaggers::casa  flag edgechans - uid___A002_Xa0b40d_X3cb8.ms iteration 1 raised 12 flagging commands
2015-07-15 16:59:10     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', reason='any', mode='list', flagbackup=False, action='apply', savepars=False, inpfile=["reason='edges' spw='11:0~4;126~127'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;124~127'", "reason='edges' spw='11:0~4'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;124~127'", "reason='edges' spw='11:0~4;126~127'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;125~127'"])
2015-07-15 16:59:12     INFO    flagdata::::casa        
2015-07-15 16:59:12     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:12     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:12     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="list",autocorr=False,inpfile=["reason='edges' spw='11:0~4;126~127'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;124~127'", "reason='edges' spw='11:0~4'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;124~127'", "reason='edges' spw='11:0~4;126~127'", "reason='edges' spw='13:0~2'", "reason='edges' spw='15:0~3;124~127'", "reason='edges' spw='9:0~3;125~127'"],
2015-07-15 16:59:12     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:12     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:12     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:12     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:12     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:12     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:12     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:12     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:12     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:12     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:12     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:12     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=False,
2015-07-15 16:59:12     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:12     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:12     INFO    flagdata::::casa        List mode is active
2015-07-15 16:59:12     INFO    flagdata::::casa        Selected 12 commands from combined input list(s) 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:12     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:12     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:12     INFO    AgentFlagger::initAgents        There are 12 valid agents in list
2015-07-15 16:59:12     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_0::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_3::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_4::chunkSummary  => Data flagged so far 1.95312%
2015-07-15 16:59:12     INFO    Manual_7::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_8::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_11::chunkSummary => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_1::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_2::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_5::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_6::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_9::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_10::chunkSummary => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_3::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_7::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_11::chunkSummary => Data flagged so far 5.46875%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_0::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_1::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_4::chunkSummary  => Data flagged so far 1.95312%
2015-07-15 16:59:12     INFO    Manual_5::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_8::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_9::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_2::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_6::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_10::chunkSummary => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_0::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_3::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_4::chunkSummary  => Data flagged so far 1.95312%
2015-07-15 16:59:12     INFO    Manual_7::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_8::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_11::chunkSummary => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_1::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_2::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_5::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_6::chunkSummary  => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    Manual_9::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_10::chunkSummary => Data flagged so far 3.125%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_3::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_7::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_11::chunkSummary => Data flagged so far 5.46875%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_0::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_1::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_4::chunkSummary  => Data flagged so far 1.95312%
2015-07-15 16:59:12     INFO    Manual_5::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    Manual_8::chunkSummary  => Data flagged so far 2.73438%
2015-07-15 16:59:12     INFO    Manual_9::chunkSummary  => Data flagged so far 1.17188%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:12     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:12     INFO    Manual_2::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_6::chunkSummary  => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    Manual_10::chunkSummary => Data flagged so far 6.25%
2015-07-15 16:59:12     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:12     INFO    Manual_0::tableSummary  => Percentage of data flagged in table selection: 1.36719%
2015-07-15 16:59:12     INFO    Manual_1::tableSummary  => Percentage of data flagged in table selection: 0.585938%
2015-07-15 16:59:12     INFO    Manual_2::tableSummary  => Percentage of data flagged in table selection: 1.5625%
2015-07-15 16:59:12     INFO    Manual_3::tableSummary  => Percentage of data flagged in table selection: 1.5625%
2015-07-15 16:59:12     INFO    Manual_4::tableSummary  => Percentage of data flagged in table selection: 0.976562%
2015-07-15 16:59:12     INFO    Manual_5::tableSummary  => Percentage of data flagged in table selection: 0.585938%
2015-07-15 16:59:12     INFO    Manual_6::tableSummary  => Percentage of data flagged in table selection: 1.5625%
2015-07-15 16:59:12     INFO    Manual_7::tableSummary  => Percentage of data flagged in table selection: 1.5625%
2015-07-15 16:59:12     INFO    Manual_8::tableSummary  => Percentage of data flagged in table selection: 1.36719%
2015-07-15 16:59:12     INFO    Manual_9::tableSummary  => Percentage of data flagged in table selection: 0.585938%
2015-07-15 16:59:12     INFO    Manual_10::tableSummary => Percentage of data flagged in table selection: 1.5625%
2015-07-15 16:59:12     INFO    Manual_11::tableSummary => Percentage of data flagged in table selection: 1.36719%
2015-07-15 16:59:12     INFO    AgentFlagger::run       => Writing flags to the MS
2015-07-15 16:59:12     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:12     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:14     INFO    flagdata::pipeline.hifa.tasks.tsysflagchans.tsysflagchans::casa Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:59:15     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:15     INFO    flagdata::::casa        
2015-07-15 16:59:15     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:15     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:15     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:15     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:15     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:15     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:15     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:15     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:15     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:15     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:15     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:15     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:15     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:15     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:15     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:15     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:15     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:15     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:15     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:15     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:15     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:15     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:15     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:15     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:15     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:15     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:15     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:15     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV11 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV18 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       array -1 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       correlation Sol1 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       correlation Sol2 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       field J1517-2422 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       field Titan flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       observation 0 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       scan 11 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       scan 3 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       scan 5 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       scan 8 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:15     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:15     INFO    Summary::getResult       spw 13 flagged: 864 total: 36864 (2.34%)
2015-07-15 16:59:15     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:15     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:15     INFO    Summary::getResult       Total Flagged: 7488 Total Counts: 147456 (5.08%)
2015-07-15 16:59:15     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:15     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:15     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:16     INFO    flagdata::pipeline.hifa.tasks.tsysflag.tsysflag::casa   flag fieldshape
2015-07-15 16:59:16     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:16     INFO    flagdata::::casa        
2015-07-15 16:59:16     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:16     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:16     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:16     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:16     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:16     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:16     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:16     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:16     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:16     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:16     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:16     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:16     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:16     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:16     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:16     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:16     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:16     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:16     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:16     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:16     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:16     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:16     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:16     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:16     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:16     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:16     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:16     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV11 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV18 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       array -1 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       correlation Sol1 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       correlation Sol2 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       field J1517-2422 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       field Titan flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       observation 0 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       scan 11 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       scan 3 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       scan 5 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       scan 8 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:16     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:16     INFO    Summary::getResult       spw 13 flagged: 864 total: 36864 (2.34%)
2015-07-15 16:59:16     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:16     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:16     INFO    Summary::getResult       Total Flagged: 7488 Total Counts: 147456 (5.08%)
2015-07-15 16:59:16     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:16     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:16     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:18     INFO    flagdata::pipeline.hifa.tasks.tsysflagspectra.tsysflagspectra::casa     Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:59:35     INFO    flagdata::pipeline.hif.tasks.common.viewflaggers::casa  flag fieldshape - uid___A002_Xa0b40d_X3cb8.ms iteration 1 raised 0 flagging commands
2015-07-15 16:59:36     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:36     INFO    flagdata::::casa        
2015-07-15 16:59:36     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:36     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:36     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:36     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:36     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:36     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:36     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:36     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:36     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:36     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:36     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:36     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:36     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:36     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:36     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:36     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:36     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:36     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:36     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:36     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:36     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:36     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:36     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:36     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:36     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:36     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:36     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:36     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV11 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV18 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       array -1 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       correlation Sol1 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       correlation Sol2 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       field J1517-2422 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       field Titan flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       observation 0 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       scan 11 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       scan 3 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       scan 5 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       scan 8 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:36     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:36     INFO    Summary::getResult       spw 13 flagged: 864 total: 36864 (2.34%)
2015-07-15 16:59:36     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:36     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:36     INFO    Summary::getResult       Total Flagged: 7488 Total Counts: 147456 (5.08%)
2015-07-15 16:59:36     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:36     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:36     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:36     INFO    flagdata::pipeline.hifa.tasks.tsysflag.tsysflag::casa   flag birdies
2015-07-15 16:59:37     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:37     INFO    flagdata::::casa        
2015-07-15 16:59:37     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:37     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:37     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:37     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:37     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:37     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:37     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:37     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:37     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:37     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:37     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:37     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:37     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:37     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:37     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:37     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:37     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:37     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:37     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:37     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:37     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:37     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:37     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:37     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:37     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:37     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:37     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:37     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV11 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV18 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       array -1 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       correlation Sol1 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       correlation Sol2 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3744 total: 73728 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       field J1517-2422 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       field Titan flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       observation 0 flagged: 7488 total: 147456 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       scan 11 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       scan 3 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       scan 5 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       scan 8 flagged: 1872 total: 36864 (5.08%)
2015-07-15 16:59:37     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:37     INFO    Summary::getResult       spw 13 flagged: 864 total: 36864 (2.34%)
2015-07-15 16:59:37     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:37     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:37     INFO    Summary::getResult       Total Flagged: 7488 Total Counts: 147456 (5.08%)
2015-07-15 16:59:37     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:37     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:37     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:39     INFO    flagdata::pipeline.hifa.tasks.tsysflagchans.tsysflagchans::casa Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:59:41     WARN    flagdata::pipeline.hif.tasks.common.viewflaggers::casa  flag birdies - uid___A002_Xa0b40d_X3cb8.ms iteration 1 raised 2 flagging commands
2015-07-15 16:59:42     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', reason='any', mode='list', flagbackup=False, action='apply', savepars=False, inpfile=["reason='sharps' antenna='24' spw='13:3~7'", "reason='sharps' antenna='30' spw='13:3~9'"])
2015-07-15 16:59:42     INFO    flagdata::::casa        
2015-07-15 16:59:42     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:42     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:42     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="list",autocorr=False,inpfile=["reason='sharps' antenna='24' spw='13:3~7'", "reason='sharps' antenna='30' spw='13:3~9'"],
2015-07-15 16:59:42     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:42     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:42     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:42     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:42     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:42     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:42     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:42     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:42     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:42     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:42     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:42     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=False,
2015-07-15 16:59:42     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:42     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:42     INFO    flagdata::::casa        List mode is active
2015-07-15 16:59:42     INFO    flagdata::::casa        Selected 2 commands from combined input list(s) 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:42     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:42     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:42     INFO    AgentFlagger::initAgents        There are 2 valid agents in list
2015-07-15 16:59:42     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    Manual_0::chunkSummary  => Data flagged so far 0.0542535%
2015-07-15 16:59:42     INFO    Manual_1::chunkSummary  => Data flagged so far 0.0759549%
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    Manual_0::chunkSummary  => Data flagged so far 0.0542535%
2015-07-15 16:59:42     INFO    Manual_1::chunkSummary  => Data flagged so far 0.0759549%
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    Manual_0::chunkSummary  => Data flagged so far 0.0542535%
2015-07-15 16:59:42     INFO    Manual_1::chunkSummary  => Data flagged so far 0.0759549%
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    Manual_0::chunkSummary  => Data flagged so far 0.0542535%
2015-07-15 16:59:42     INFO    Manual_1::chunkSummary  => Data flagged so far 0.0759549%
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:42     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:42     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:42     INFO    Manual_0::tableSummary  => Percentage of data flagged in table selection: 0.0271267%
2015-07-15 16:59:42     INFO    Manual_1::tableSummary  => Percentage of data flagged in table selection: 0.0379774%
2015-07-15 16:59:42     INFO    AgentFlagger::run       => Writing flags to the MS
2015-07-15 16:59:42     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:42     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:44     INFO    flagdata::pipeline.hifa.tasks.tsysflagchans.tsysflagchans::casa Computing flagging metrics for caltable /mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl 
2015-07-15 16:59:46     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:46     INFO    flagdata::::casa        
2015-07-15 16:59:46     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:46     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:46     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:46     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:46     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:46     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:46     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:46     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:46     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:46     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:46     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:46     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:46     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:46     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:46     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:46     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:46     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:46     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:46     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:46     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:46     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV11 flagged: 248 total: 4096 (6.05%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV18 flagged: 264 total: 4096 (6.45%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:46     INFO    Summary::getResult       array -1 flagged: 7584 total: 147456 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       correlation Sol1 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       correlation Sol2 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       field J1517-2422 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       field Titan flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       observation 0 flagged: 7584 total: 147456 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       scan 11 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       scan 3 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       scan 5 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       scan 8 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:46     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:46     INFO    Summary::getResult       spw 13 flagged: 960 total: 36864 (2.6%)
2015-07-15 16:59:46     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:46     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:46     INFO    Summary::getResult       Total Flagged: 7584 Total Counts: 147456 (5.14%)
2015-07-15 16:59:46     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:46     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:46     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:46     INFO    flagdata::pipeline.infrastructure.jobrequest::casa      Executing flagdata(vis='uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl', mode='summary')
2015-07-15 16:59:46     INFO    flagdata::::casa        
2015-07-15 16:59:46     INFO    flagdata::::casa+       ##########################################
2015-07-15 16:59:46     INFO    flagdata::::casa+       ##### Begin Task: flagdata           #####
2015-07-15 16:59:46     INFO    flagdata::::casa        flagdata(vis="/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl",mode="summary",autocorr=False,inpfile="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               reason="any",tbuff=0.0,spw="",field="",antenna="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               uvrange="",timerange="",correlation="",scan="",intent="",
2015-07-15 16:59:46     INFO    flagdata::::casa+               array="",observation="",feed="",clipminmax=[],datacolumn="DATA",
2015-07-15 16:59:46     INFO    flagdata::::casa+               clipoutside=True,channelavg=False,clipzeros=False,quackinterval=1.0,quackmode="beg",
2015-07-15 16:59:46     INFO    flagdata::::casa+               quackincrement=False,tolerance=0.0,addantenna="",lowerlimit=0.0,upperlimit=90.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               ntime="scan",combinescans=False,timecutoff=4.0,freqcutoff=3.0,timefit="line",
2015-07-15 16:59:46     INFO    flagdata::::casa+               freqfit="poly",maxnpieces=7,flagdimension="freqtime",usewindowstats="none",halfwin=1,
2015-07-15 16:59:46     INFO    flagdata::::casa+               extendflags=True,winsize=3,timedev="",freqdev="",timedevscale=5.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,extendpols=True,growtime=50.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               growfreq=50.0,growaround=False,flagneartime=False,flagnearfreq=False,minrel=0.0,
2015-07-15 16:59:46     INFO    flagdata::::casa+               maxrel=1.0,minabs=0,maxabs=-1,spwchan=False,spwcorr=False,
2015-07-15 16:59:46     INFO    flagdata::::casa+               basecnt=False,name="Summary",action="apply",display="",flagbackup=True,
2015-07-15 16:59:46     INFO    flagdata::::casa+               savepars=False,cmdreason="",outfile="")
2015-07-15 16:59:46     INFO    AgentFlagger::open      Table type is Calibration
2015-07-15 16:59:47     INFO    flagdata::::casa        Summary mode is active
2015-07-15 16:59:47     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2015-07-15 16:59:47     INFO    FlagCalTableHandler::selectData         Original CalTable has 576 rows, and selected CalTable has 576 rows
2015-07-15 16:59:47     INFO    flagdata::::casa        Initializing the agents
2015-07-15 16:59:47     INFO    Summary::setAgentParameters      Spw-Channel count deactivated 
2015-07-15 16:59:47     INFO    Summary::setAgentParameters      Spw-Correlation count deactivated 
2015-07-15 16:59:47     INFO    Summary::setAgentParameters      Baseline count deactivated 
2015-07-15 16:59:47     INFO    AgentFlagger::initAgents        There are 1 valid agents in list
2015-07-15 16:59:47     INFO    flagdata::::casa        Running the agentflagger tool
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 1 [progress: 6%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 3 [progress: 18%], Observation = 0~0, Scan = 3~3, Field = 0 (J1517-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 5 [progress: 31%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 6 [progress: 37%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 8 [progress: 50%], Observation = 0~0, Scan = 5~5, Field = 1 (Titan), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 9 [progress: 56%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 11 [progress: 68%], Observation = 0~0, Scan = 8~8, Field = 3 (IRAS16293-2422), Spw = 13, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 13 [progress: 81%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 9, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 14 [progress: 87%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 11, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   ------------------------------------------------------------------------------------ 
2015-07-15 16:59:47     INFO    FlagCalTableHandler::   Chunk = 16 [progress: 100%], Observation = 0~0, Scan = 11~11, Field = 3 (IRAS16293-2422), Spw = 15, Channels = 128, CalSolutions = [ Sol1 Sol2 ], Total Rows = 36
2015-07-15 16:59:47     INFO    FlagCalTableHandler::nextChunk  ==================================================================================== 
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA41 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA42 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA43 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA44 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA45 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA46 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA49 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA51 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA52 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA53 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA57 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA59 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA60 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA61 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA62 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA63 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DA64 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV01 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV02 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV04 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV05 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV08 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV09 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV10 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV11 flagged: 248 total: 4096 (6.05%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV12 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV14 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV15 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV16 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV17 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV18 flagged: 264 total: 4096 (6.45%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV19 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV20 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV21 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV22 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       antenna DV23 flagged: 208 total: 4096 (5.08%)
2015-07-15 16:59:47     INFO    Summary::getResult       array -1 flagged: 7584 total: 147456 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       correlation Sol1 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       correlation Sol2 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       field IRAS16293-2422 flagged: 3792 total: 73728 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       field J1517-2422 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       field Titan flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       observation 0 flagged: 7584 total: 147456 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       scan 11 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       scan 3 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       scan 5 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       scan 8 flagged: 1896 total: 36864 (5.14%)
2015-07-15 16:59:47     INFO    Summary::getResult       spw 11 flagged: 2016 total: 36864 (5.47%)
2015-07-15 16:59:47     INFO    Summary::getResult       spw 13 flagged: 960 total: 36864 (2.6%)
2015-07-15 16:59:47     INFO    Summary::getResult       spw 15 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:47     INFO    Summary::getResult       spw 9 flagged: 2304 total: 36864 (6.25%)
2015-07-15 16:59:47     INFO    Summary::getResult       Total Flagged: 7584 Total Counts: 147456 (5.14%)
2015-07-15 16:59:47     INFO    flagdata::::casa        Flags are not written to the MS. (action='calculate')
2015-07-15 16:59:47     INFO    flagdata::::casa        ##### End Task: flagdata             #####
2015-07-15 16:59:47     INFO    flagdata::::casa+       ##########################################
Pipeline QA summary for this task.
Score Reason
1.00 5.13% of data in uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl was newly flagged
fe_edge_limit
3.0
flag_derivative
True
ff_refintent
BANDPASS
flag_birdies
True
caltable
/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms.hifa_tsyscal.s5_1.tsyscal.tbl
ff_max_limit
5.0
fnm_limit
2.0
vis
['/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working/uid___A002_Xa0b40d_X3cb8.ms']
output_dir
/mnt/jaosco/pipeline/data/2013.1.00278.S_2015_07_15T16_13_56.693/SOUS_uid___A001_X120_X100/GOUS_uid___A001_X120_X101/MOUS_uid___A001_X120_X102/working
flag_edgechans
True
ff_tmf1_limit
0.666
fb_sharps_limit
0.05
flag_fieldshape
True
fd_max_limit
5.0
flag_nmedian
True
Start time
2015-07-15 16:58:42.271539
End
2015-07-15 16:59:47.868594
Duration
0:01:05.597055
Context size
11.8 MB